CURE: Interdisciplinary Undergraduate Research: Optimization of Multi Two-Level Batch Testing

Optimization of Multi Two-Level Batch Testing

CURE: Interdisciplinary Undergraduate Research: Optimization of Multi Two-Level Batch Testing

Student Presenters

Richard McCoy, Aryeh Silver, Sophia Keane

Faculty Mentor

Dr., Anne Donnelly

College

Center for Undergraduate Research

Abstract

As the COVID-19 pandemic continues to spread, it is vital to administer rapid testing to help curb asymptomatic transmission. Thus, it is paramount that the most efficient testing method be identified and implemented, as to reduce the strain on the medical community. This project introduces a novel batch testing method called multi two-level batch testing, which was hypothesized to increase the efficiency of batch testing in terms of minimizing the number of tests performed for a given population. While Dorfman’s two-level and Li’s multi-level batch testing methods already exist, this method offers a novel strategy distinct from existing methods. A Java simulation was created to iteratively compute the number of tests required for each testing method at various percentages of population infection rate, batch sizes, and other parameters specific to each method. Based on this simulation, it can be shown that the multi two-level procedure is more efficient than both the two-level and the multi two-level procedures at an infection rate of 0.01, which is the anticipated rate at the University of Florida during the Spring 2021 semester. Additionally, at infection rates between 0.05 and 0.30, the multi two-level batch testing method performs comparably to multi-level and outperforms two-level. When the infection rate exceeds 0.30, all methods are unviable and begin to require more tests than necessary to test each person in the population individually. If laboratories implement multi two-level batch testing, they may reduce costs and labor. Additionally, our batch testing procedure can be applied to other diseases.

Poster

Research Pitch

Hover over poster image below to zoom.  To fit poster to screen, click the poster image below.

Click to play the student’s research pitch below.

To comment below, please sign in with Facebook or Google (using your ufl account) by clicking the little round icons to the right. If you decide, you can post as a guest by entering name and email below, but will lose some features. You can also subscribe to a students page to get updates on comments!

Leave a Reply